Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.02■□□□□ 0.48
MSI1O43347 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MSI1O43347 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.02■□□□□ 0.48
MSI1O43347 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.02■□□□□ 0.48
MSI1O43347 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MSI1O43347 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.02■□□□□ 0.48
MSI1O43347 AL356488.2-201ENST00000602755 427 ntBASIC18.02■□□□□ 0.48
MSI1O43347 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MSI1O43347 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
MSI1O43347 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.02■□□□□ 0.48
MSI1O43347 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.02■□□□□ 0.47
MSI1O43347 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
MSI1O43347 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSI1O43347 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.02■□□□□ 0.47
MSI1O43347 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSI1O43347 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSI1O43347 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
MSI1O43347 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MSI1O43347 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.01■□□□□ 0.47
MSI1O43347 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.01■□□□□ 0.47
MSI1O43347 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.01■□□□□ 0.47
MSI1O43347 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.01■□□□□ 0.47
MSI1O43347 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.01■□□□□ 0.47
MSI1O43347 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.01■□□□□ 0.47
MSI1O43347 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
MSI1O43347 AL353135.1-201ENST00000606729 504 ntBASIC18.01■□□□□ 0.47
MSI1O43347 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.01■□□□□ 0.47
MSI1O43347 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
MSI1O43347 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
MSI1O43347 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.01■□□□□ 0.47
MSI1O43347 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
MSI1O43347 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
MSI1O43347 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
MSI1O43347 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 AL138688.1-201ENST00000624851 1594 ntBASIC18■□□□□ 0.47
MSI1O43347 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MSI1O43347 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18■□□□□ 0.47
MSI1O43347 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18■□□□□ 0.47
MSI1O43347 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18■□□□□ 0.47
MSI1O43347 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18■□□□□ 0.47
MSI1O43347 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18■□□□□ 0.47
MSI1O43347 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18■□□□□ 0.47
MSI1O43347 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18■□□□□ 0.47
MSI1O43347 IGHV3-22-201ENST00000520721 359 ntBASIC18■□□□□ 0.47
MSI1O43347 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18■□□□□ 0.47
MSI1O43347 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18■□□□□ 0.47
MSI1O43347 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
MSI1O43347 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18■□□□□ 0.47
MSI1O43347 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
MSI1O43347 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 CROCCP2-202ENST00000412962 2773 ntBASIC17.99■□□□□ 0.47
MSI1O43347 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.99■□□□□ 0.47
MSI1O43347 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.99■□□□□ 0.47
MSI1O43347 ACTG1P4-201ENST00000425123 1122 ntBASIC17.99■□□□□ 0.47
MSI1O43347 AC136632.2-201ENST00000512891 861 ntBASIC17.99■□□□□ 0.47
MSI1O43347 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.99■□□□□ 0.47
MSI1O43347 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.99■□□□□ 0.47
MSI1O43347 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
MSI1O43347 MIR1199-201ENST00000621445 119 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms