Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PHGDHO43175 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.3■□□□□ 0.36
PHGDHO43175 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.3■□□□□ 0.36
PHGDHO43175 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.29■□□□□ 0.36
PHGDHO43175 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PHGDHO43175 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
PHGDHO43175 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 TMPOP1-202ENST00000424642 1267 ntBASIC17.29■□□□□ 0.36
PHGDHO43175 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.29■□□□□ 0.36
PHGDHO43175 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.29■□□□□ 0.36
PHGDHO43175 LINC01238-205ENST00000567549 1107 ntBASIC17.29■□□□□ 0.36
PHGDHO43175 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.29■□□□□ 0.36
PHGDHO43175 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
PHGDHO43175 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.29■□□□□ 0.36
PHGDHO43175 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PHGDHO43175 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.29■□□□□ 0.36
PHGDHO43175 AL138831.2-201ENST00000606564 490 ntBASIC17.29■□□□□ 0.36
PHGDHO43175 AL353801.3-201ENST00000609898 542 ntBASIC17.29■□□□□ 0.36
PHGDHO43175 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PHGDHO43175 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.29■□□□□ 0.36
PHGDHO43175 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PHGDHO43175 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 MYCLP1-201ENST00000372451 1075 ntBASIC17.28■□□□□ 0.36
PHGDHO43175 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.28■□□□□ 0.36
PHGDHO43175 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.28■□□□□ 0.36
PHGDHO43175 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.28■□□□□ 0.36
PHGDHO43175 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PHGDHO43175 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.28■□□□□ 0.36
PHGDHO43175 AC105020.1-201ENST00000435356 2205 ntBASIC17.28■□□□□ 0.36
PHGDHO43175 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.28■□□□□ 0.36
PHGDHO43175 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PHGDHO43175 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.27■□□□□ 0.36
PHGDHO43175 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
PHGDHO43175 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PHGDHO43175 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.27■□□□□ 0.36
PHGDHO43175 AL136038.3-201ENST00000561909 1096 ntBASIC17.27■□□□□ 0.36
PHGDHO43175 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PHGDHO43175 AC011840.4-201ENST00000578471 627 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms