Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRANK1O15050 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18■□□□□ 0.47
TRANK1O15050 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18■□□□□ 0.47
TRANK1O15050 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18■□□□□ 0.47
TRANK1O15050 TEX28P1-201ENST00000613479 1221 ntBASIC18■□□□□ 0.47
TRANK1O15050 TEX28P2-201ENST00000617764 1221 ntBASIC18■□□□□ 0.47
TRANK1O15050 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18■□□□□ 0.47
TRANK1O15050 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18■□□□□ 0.47
TRANK1O15050 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRANK1O15050 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18■□□□□ 0.47
TRANK1O15050 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18■□□□□ 0.47
TRANK1O15050 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18■□□□□ 0.47
TRANK1O15050 AC005412.3-201ENST00000580309 715 ntBASIC18■□□□□ 0.47
TRANK1O15050 SPDYE12P-201ENST00000618416 771 ntBASIC18■□□□□ 0.47
TRANK1O15050 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18■□□□□ 0.47
TRANK1O15050 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRANK1O15050 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRANK1O15050 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRANK1O15050 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.99■□□□□ 0.47
TRANK1O15050 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.99■□□□□ 0.47
TRANK1O15050 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
TRANK1O15050 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.99■□□□□ 0.47
TRANK1O15050 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.99■□□□□ 0.47
TRANK1O15050 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 MIR658-201ENST00000385210 100 ntBASIC17.99■□□□□ 0.47
TRANK1O15050 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.99■□□□□ 0.47
TRANK1O15050 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.99■□□□□ 0.47
TRANK1O15050 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.99■□□□□ 0.47
TRANK1O15050 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
TRANK1O15050 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRANK1O15050 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.98■□□□□ 0.47
TRANK1O15050 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TRANK1O15050 FOXO1B-201ENST00000504678 1527 ntBASIC17.98■□□□□ 0.47
TRANK1O15050 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.98■□□□□ 0.47
TRANK1O15050 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.98■□□□□ 0.47
TRANK1O15050 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.98■□□□□ 0.47
TRANK1O15050 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.98■□□□□ 0.47
TRANK1O15050 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRANK1O15050 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.98■□□□□ 0.47
TRANK1O15050 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.98■□□□□ 0.47
TRANK1O15050 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 API5-211ENST00000534695 560 ntTSL 5 BASIC17.98■□□□□ 0.47
TRANK1O15050 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRANK1O15050 AC004840.1-201ENST00000636359 365 ntBASIC17.98■□□□□ 0.47
TRANK1O15050 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRANK1O15050 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRANK1O15050 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.97■□□□□ 0.47
TRANK1O15050 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRANK1O15050 AC012569.1-201ENST00000591191 1524 ntBASIC17.97■□□□□ 0.47
TRANK1O15050 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRANK1O15050 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRANK1O15050 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.97■□□□□ 0.47
TRANK1O15050 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRANK1O15050 HMGA1P7-201ENST00000406908 502 ntBASIC17.97■□□□□ 0.47
TRANK1O15050 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.97■□□□□ 0.47
TRANK1O15050 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.97■□□□□ 0.47
TRANK1O15050 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRANK1O15050 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.97■□□□□ 0.47
TRANK1O15050 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRANK1O15050 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms