Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC27.65■■■□□ 2.02
CHD1O14646 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC27.65■■■□□ 2.02
CHD1O14646 AL512361.1-201ENST00000554200 418 ntBASIC27.65■■■□□ 2.02
CHD1O14646 WNT11-204ENST00000621122 789 ntTSL 5 BASIC27.65■■■□□ 2.02
CHD1O14646 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC27.65■■■□□ 2.02
CHD1O14646 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC27.65■■■□□ 2.02
CHD1O14646 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC27.65■■■□□ 2.02
CHD1O14646 BTBD7P1-201ENST00000447253 1453 ntBASIC27.65■■■□□ 2.02
CHD1O14646 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
CHD1O14646 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
CHD1O14646 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
CHD1O14646 NME6-203ENST00000415644 849 ntTSL 2 BASIC27.64■■■□□ 2.02
CHD1O14646 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC27.64■■■□□ 2.02
CHD1O14646 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC27.64■■■□□ 2.02
CHD1O14646 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC27.64■■■□□ 2.02
CHD1O14646 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC27.64■■■□□ 2.02
CHD1O14646 PTGES2-AS1-201ENST00000443493 2100 ntBASIC27.64■■■□□ 2.02
CHD1O14646 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CHD1O14646 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC27.64■■■□□ 2.01
CHD1O14646 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.01
CHD1O14646 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CHD1O14646 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CHD1O14646 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CHD1O14646 MTND6P24-201ENST00000440466 518 ntBASIC27.64■■■□□ 2.01
CHD1O14646 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CHD1O14646 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC27.64■■■□□ 2.01
CHD1O14646 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CHD1O14646 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC27.64■■■□□ 2.01
CHD1O14646 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHD1O14646 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHD1O14646 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
CHD1O14646 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHD1O14646 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CHD1O14646 AC099568.2-201ENST00000609194 695 ntBASIC27.63■■■□□ 2.01
CHD1O14646 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC27.62■■■□□ 2.01
CHD1O14646 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC27.62■■■□□ 2.01
CHD1O14646 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC27.62■■■□□ 2.01
CHD1O14646 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 PP14571-201ENST00000404327 934 ntTSL 2 BASIC27.62■■■□□ 2.01
CHD1O14646 USP32P1-208ENST00000506594 1164 ntBASIC27.62■■■□□ 2.01
CHD1O14646 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC27.62■■■□□ 2.01
CHD1O14646 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC27.62■■■□□ 2.01
CHD1O14646 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC27.62■■■□□ 2.01
CHD1O14646 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC27.62■■■□□ 2.01
CHD1O14646 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
CHD1O14646 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
CHD1O14646 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CHD1O14646 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 FAM220BP-201ENST00000377689 816 ntBASIC27.61■■■□□ 2.01
CHD1O14646 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC27.61■■■□□ 2.01
CHD1O14646 AL133215.2-201ENST00000609242 977 ntBASIC27.61■■■□□ 2.01
CHD1O14646 PCDHAC2-203ENST00000615316 3011 ntBASIC27.61■■■□□ 2.01
CHD1O14646 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
CHD1O14646 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC27.61■■■□□ 2.01
CHD1O14646 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
CHD1O14646 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC27.61■■■□□ 2.01
CHD1O14646 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC27.61■■■□□ 2.01
CHD1O14646 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CHD1O14646 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CHD1O14646 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD1O14646 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD1O14646 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD1O14646 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
CHD1O14646 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC27.6■■■□□ 2.01
CHD1O14646 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC27.6■■■□□ 2.01
CHD1O14646 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CHD1O14646 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC27.6■■■□□ 2.01
CHD1O14646 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
CHD1O14646 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD1O14646 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
CHD1O14646 HLA-H-201ENST00000383620 1096 ntBASIC27.59■■■□□ 2.01
CHD1O14646 AL353705.2-201ENST00000428243 662 ntBASIC27.59■■■□□ 2.01
CHD1O14646 AC007389.4-201ENST00000454674 793 ntBASIC27.59■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms