Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CLIC1O00299 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLIC1O00299 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLIC1O00299 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 KRT18P57-201ENST00000443599 1254 ntBASIC16.38■□□□□ 0.21
CLIC1O00299 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 AC092647.4-201ENST00000457211 535 ntBASIC16.38■□□□□ 0.21
CLIC1O00299 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CLIC1O00299 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 AC006011.2-201ENST00000621313 1158 ntBASIC16.38■□□□□ 0.21
CLIC1O00299 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.38■□□□□ 0.21
CLIC1O00299 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.38■□□□□ 0.21
CLIC1O00299 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLIC1O00299 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.37■□□□□ 0.21
CLIC1O00299 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLIC1O00299 SPDYE13P-201ENST00000445314 798 ntBASIC16.37■□□□□ 0.21
CLIC1O00299 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.37■□□□□ 0.21
CLIC1O00299 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.37■□□□□ 0.21
CLIC1O00299 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CLIC1O00299 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLIC1O00299 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CLIC1O00299 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLIC1O00299 AC125634.1-201ENST00000438758 1403 ntBASIC16.36■□□□□ 0.21
CLIC1O00299 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CLIC1O00299 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLIC1O00299 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms