Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 SLC25A1P3-201ENST00000395415 828 ntBASIC17.55■□□□□ 0.4
AP3B1O00203 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.55■□□□□ 0.4
AP3B1O00203 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 KRT17P6-201ENST00000453795 1220 ntBASIC17.55■□□□□ 0.4
AP3B1O00203 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.55■□□□□ 0.4
AP3B1O00203 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
AP3B1O00203 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP3B1O00203 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
AP3B1O00203 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP3B1O00203 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 TPSP2-201ENST00000561760 610 ntBASIC17.54■□□□□ 0.4
AP3B1O00203 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 AP000550.4-202ENST00000639755 178 ntBASIC17.54■□□□□ 0.4
AP3B1O00203 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 INTS4P1-201ENST00000438455 1935 ntBASIC17.54■□□□□ 0.4
AP3B1O00203 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
AP3B1O00203 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.54■□□□□ 0.4
AP3B1O00203 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP3B1O00203 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
AP3B1O00203 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 EGFEM1P-202ENST00000431685 1563 ntBASIC17.53■□□□□ 0.4
AP3B1O00203 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.53■□□□□ 0.4
AP3B1O00203 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
AP3B1O00203 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP3B1O00203 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3B1O00203 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3B1O00203 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.53■□□□□ 0.4
AP3B1O00203 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.53■□□□□ 0.4
AP3B1O00203 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
AP3B1O00203 AP005901.3-202ENST00000581653 237 ntBASIC17.53■□□□□ 0.4
AP3B1O00203 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
AP3B1O00203 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
AP3B1O00203 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.53■□□□□ 0.4
AP3B1O00203 AC073592.5-201ENST00000624854 528 ntBASIC17.53■□□□□ 0.4
AP3B1O00203 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 AC009053.2-201ENST00000563701 2365 ntBASIC17.53■□□□□ 0.4
AP3B1O00203 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP3B1O00203 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.52■□□□□ 0.4
AP3B1O00203 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP3B1O00203 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3B1O00203 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.52■□□□□ 0.4
AP3B1O00203 AL135999.2-201ENST00000622438 1686 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms