Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
DDX39AO00148 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
DDX39AO00148 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 AC145285.3-201ENST00000564603 959 ntBASIC19.52■□□□□ 0.72
DDX39AO00148 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.52■□□□□ 0.72
DDX39AO00148 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DDX39AO00148 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX39AO00148 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX39AO00148 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX39AO00148 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX39AO00148 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
DDX39AO00148 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
DDX39AO00148 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX39AO00148 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX39AO00148 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 PMS2P1-201ENST00000431037 1228 ntBASIC19.51■□□□□ 0.71
DDX39AO00148 AC007967.2-201ENST00000432613 625 ntBASIC19.51■□□□□ 0.71
DDX39AO00148 AC009947.1-201ENST00000444350 727 ntBASIC19.51■□□□□ 0.71
DDX39AO00148 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX39AO00148 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.51■□□□□ 0.71
DDX39AO00148 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.51■□□□□ 0.71
DDX39AO00148 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 AL353135.1-201ENST00000606729 504 ntBASIC19.51■□□□□ 0.71
DDX39AO00148 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX39AO00148 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.51■□□□□ 0.71
DDX39AO00148 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.51■□□□□ 0.71
DDX39AO00148 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
DDX39AO00148 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DDX39AO00148 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DDX39AO00148 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 AC108751.1-201ENST00000490852 363 ntBASIC19.5■□□□□ 0.71
DDX39AO00148 RPS15P9-201ENST00000494093 319 ntBASIC19.5■□□□□ 0.71
DDX39AO00148 KRT18P58-201ENST00000527480 1120 ntBASIC19.5■□□□□ 0.71
DDX39AO00148 AC140113.2-201ENST00000604370 208 ntBASIC19.5■□□□□ 0.71
DDX39AO00148 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.5■□□□□ 0.71
DDX39AO00148 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DDX39AO00148 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DDX39AO00148 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.49■□□□□ 0.71
DDX39AO00148 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DDX39AO00148 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 PTCHD3P3-201ENST00000403073 906 ntBASIC19.49■□□□□ 0.71
DDX39AO00148 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
DDX39AO00148 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DDX39AO00148 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.49■□□□□ 0.71
DDX39AO00148 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms