Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
USP17L11C9JVI0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
USP17L11C9JVI0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 ACTG1P14-201ENST00000446382 1122 ntBASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 CXCL1P1-201ENST00000502804 216 ntBASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AL133373.2-201ENST00000623187 2828 ntBASIC20.07■□□□□ 0.8
USP17L11C9JVI0 AL355312.1-201ENST00000407115 2176 ntBASIC20.07■□□□□ 0.8
USP17L11C9JVI0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
USP17L11C9JVI0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 FAM58CP-201ENST00000435741 640 ntBASIC20.06■□□□□ 0.8
USP17L11C9JVI0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 RFPL4AP1-201ENST00000530883 850 ntBASIC20.06■□□□□ 0.8
USP17L11C9JVI0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 AP002472.1-201ENST00000577490 586 ntBASIC20.06■□□□□ 0.8
USP17L11C9JVI0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP17L11C9JVI0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.05■□□□□ 0.8
USP17L11C9JVI0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP17L11C9JVI0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms