Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 AC004967.1-201ENST00000453589 447 ntBASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 AC005829.1-201ENST00000570002 483 ntBASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 AC134684.3-201ENST00000641758 218 ntBASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TBC1D3FA6NER0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TBC1D3FA6NER0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 AL590787.1-201ENST00000568856 1315 ntBASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 AC211486.1-202ENST00000416371 468 ntBASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 AC211476.1-201ENST00000503899 468 ntBASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 AL139327.4-201ENST00000612362 153 ntBASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 AL513190.1-201ENST00000621254 727 ntBASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.26■□□□□ 0.35
TBC1D3FA6NER0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 AP001160.2-201ENST00000596071 487 ntBASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 AL390961.4-201ENST00000623958 2535 ntBASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TBC1D3FA6NER0 AL354751.1-201ENST00000412768 1863 ntBASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TBC1D3FA6NER0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms