Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AC113404.2-201ENST00000507884 177 ntBASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AC069148.1-201ENST00000608741 768 ntBASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AC093458.2-201ENST00000623150 629 ntBASIC15.73■□□□□ 0.11
TMEM129A0AVI4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 AL162727.3-201ENST00000635661 2787 ntBASIC15.73■□□□□ 0.11
TMEM129A0AVI4 KRT8P47-201ENST00000604727 1398 ntBASIC15.73■□□□□ 0.11
TMEM129A0AVI4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM129A0AVI4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 LINC02012-201ENST00000608206 1725 ntBASIC15.72■□□□□ 0.11
TMEM129A0AVI4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 RNF126P1-202ENST00000569893 925 ntBASIC15.72■□□□□ 0.11
TMEM129A0AVI4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 AC016734.2-201ENST00000624325 1377 ntBASIC15.72■□□□□ 0.11
TMEM129A0AVI4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM129A0AVI4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AC046185.3-201ENST00000623228 1824 ntBASIC15.71■□□□□ 0.11
TMEM129A0AVI4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 KRT18P65-201ENST00000439811 1286 ntBASIC15.71■□□□□ 0.11
TMEM129A0AVI4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 BX276092.7-203ENST00000637198 1536 ntBASIC15.71■□□□□ 0.11
TMEM129A0AVI4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TMEM129A0AVI4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM129A0AVI4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.71■□□□□ 0.1
TMEM129A0AVI4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM129A0AVI4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
TMEM129A0AVI4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TMEM129A0AVI4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEM129A0AVI4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms