Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AP002414.1-201ENST00000391405 1147 ntBASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 RPS2P1-201ENST00000434010 821 ntBASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 OR7E14P-202ENST00000530490 1290 ntBASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV5-4A0A0C4DH59 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC073621.1-201ENST00000392730 636 ntBASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AF186996.4-201ENST00000467186 377 ntBASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC006557.2-201ENST00000592985 1240 ntBASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC148477.8-201ENST00000624298 468 ntBASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC060834.1-201ENST00000443027 2032 ntBASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV5-4A0A0C4DH59 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 ELK2BP-201ENST00000415014 1224 ntBASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 TPM4P1-201ENST00000436100 807 ntBASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 AC008735.5-201ENST00000623544 497 ntBASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRBV5-4A0A0C4DH59 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms