Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AC092474.2-201ENST00000424288 719 ntBASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AC087163.2-201ENST00000457299 853 ntBASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AC067863.1-201ENST00000494933 530 ntBASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC187A0A096LP49 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AP000997.3-201ENST00000623333 2250 ntBASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AL627223.1-201ENST00000416693 442 ntBASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 COX20P2-201ENST00000452636 358 ntBASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AC009093.7-201ENST00000623853 1223 ntBASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCDC187A0A096LP49 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AL355306.1-201ENST00000415580 579 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 AL671277.1-201ENST00000429656 993 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SPDYE11-202ENST00000450699 704 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SLC25A6P2-201ENST00000497974 877 ntBASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.35■□□□□ 0.21
CCDC187A0A096LP49 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms