Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX49Q9Y6V7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AC024563.2-201ENST00000603282 481 ntBASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AL592071.1-201ENST00000611956 408 ntBASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AC124864.1-201ENST00000623408 392 ntBASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
DDX49Q9Y6V7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 KRT18P31-201ENST00000506277 1292 ntBASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
DDX49Q9Y6V7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
DDX49Q9Y6V7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC004870.1-201ENST00000315132 882 ntBASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC012615.1-201ENST00000565797 1299 ntBASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC104692.2-201ENST00000603054 253 ntBASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 AC133963.1-201ENST00000504166 1679 ntBASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
DDX49Q9Y6V7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
DDX49Q9Y6V7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms