Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 AC018695.7-201ENST00000624587 2492 ntBASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA11Q9Y5H2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AC109462.3-201ENST00000573934 613 ntBASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 AC233702.3-201ENST00000578656 1387 ntBASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA11Q9Y5H2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 MST1L-201ENST00000442552 2185 ntBASIC16.87■□□□□ 0.29
PCDHGA11Q9Y5H2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHGA11Q9Y5H2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms