Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.58□□□□□ -0.07
KCNIP3Q9Y2W7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP3Q9Y2W7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
KCNIP3Q9Y2W7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
KCNIP3Q9Y2W7 TSPY26P-202ENST00000565928 3884 ntBASIC14.58□□□□□ -0.07
KCNIP3Q9Y2W7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 BX276092.7-203ENST00000637198 1536 ntBASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KCNIP3Q9Y2W7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 RPPH1-201ENST00000516869 333 ntBASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 AC116353.5-201ENST00000638148 1699 ntBASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KCNIP3Q9Y2W7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 AC005915.1-201ENST00000624912 2018 ntBASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KCNIP3Q9Y2W7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms