Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AC100803.2-201ENST00000562459 1963 ntBASIC16.41■□□□□ 0.22
RNF6Q9Y252 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AC104819.1-201ENST00000504587 486 ntBASIC16.41■□□□□ 0.22
RNF6Q9Y252 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 CROCCP1-201ENST00000426910 5675 ntBASIC16.41■□□□□ 0.22
RNF6Q9Y252 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RNF6Q9Y252 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF6Q9Y252 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 KRT18P31-201ENST00000506277 1292 ntBASIC16.4■□□□□ 0.22
RNF6Q9Y252 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 AL390719.2-201ENST00000606993 987 ntBASIC16.4■□□□□ 0.22
RNF6Q9Y252 AL031008.1-201ENST00000619963 541 ntBASIC16.4■□□□□ 0.22
RNF6Q9Y252 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF6Q9Y252 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RNF6Q9Y252 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RNF6Q9Y252 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RNF6Q9Y252 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RNF6Q9Y252 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms