Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA1Q9UND3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 AC098831.1-202ENST00000438821 336 ntBASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 LETM1P2-201ENST00000597330 2178 ntBASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA1Q9UND3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 BX005266.1-201ENST00000473402 457 ntBASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 IGHV3-22-201ENST00000520721 359 ntBASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AC008735.5-201ENST00000623544 497 ntBASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AC100803.2-201ENST00000562459 1963 ntBASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA1Q9UND3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC010460.3-201ENST00000511359 1579 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC006116.8-202ENST00000587620 1550 ntBASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPA1Q9UND3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms