Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 PCDHA1-201ENST00000378133 2726 ntBASIC19.95■□□□□ 0.78
USP25Q9UHP3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 AK4P3-201ENST00000418260 669 ntBASIC19.95■□□□□ 0.78
USP25Q9UHP3 AC096633.1-201ENST00000422446 749 ntBASIC19.95■□□□□ 0.78
USP25Q9UHP3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 AL359075.1-203ENST00000462729 1002 ntBASIC19.95■□□□□ 0.78
USP25Q9UHP3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP25Q9UHP3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP25Q9UHP3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 AC112907.2-201ENST00000448639 330 ntBASIC19.94■□□□□ 0.78
USP25Q9UHP3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 AL390719.2-201ENST00000606993 987 ntBASIC19.94■□□□□ 0.78
USP25Q9UHP3 AC006011.2-201ENST00000621313 1158 ntBASIC19.94■□□□□ 0.78
USP25Q9UHP3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
USP25Q9UHP3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP25Q9UHP3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 AC005915.1-201ENST00000624912 2018 ntBASIC19.93■□□□□ 0.78
USP25Q9UHP3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 AC211429.1-201ENST00000415277 523 ntBASIC19.93■□□□□ 0.78
USP25Q9UHP3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 AC005332.3-201ENST00000589904 676 ntBASIC19.93■□□□□ 0.78
USP25Q9UHP3 LINC01023-201ENST00000606054 436 ntBASIC19.93■□□□□ 0.78
USP25Q9UHP3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP25Q9UHP3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
USP25Q9UHP3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms