Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12□□□□□ -0.49
CDC42SE2Q9NRR3 AC092053.1-201ENST00000605787 1936 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 MIR662-201ENST00000384847 95 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 SLC25A1P3-201ENST00000395415 828 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 SPDYE15P-201ENST00000424157 909 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 IGHV3-52-201ENST00000519770 353 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 AL441883.1-201ENST00000566170 1045 ntBASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.99□□□□□ -0.49
CDC42SE2Q9NRR3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 AC010460.3-201ENST00000511359 1579 ntBASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SLC25A3P1-201ENST00000443844 931 ntBASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 ATP5G1P1-201ENST00000448724 379 ntBASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CDC42SE2Q9NRR3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms