Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CTPS2Q9NRF8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS2Q9NRF8 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.21■□□□□ 0.18
CTPS2Q9NRF8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS2Q9NRF8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CTPS2Q9NRF8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CTPS2Q9NRF8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 BX276092.5-203ENST00000456199 560 ntBASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 IGHV3-41-201ENST00000613121 348 ntBASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 AC124864.1-201ENST00000623408 392 ntBASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 IER3-202ENST00000376377 1350 ntBASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CTPS2Q9NRF8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 RN7SL606P-201ENST00000472779 293 ntBASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AC090616.6-201ENST00000582640 721 ntBASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AL121672.3-201ENST00000608644 468 ntBASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AL592071.1-201ENST00000611956 408 ntBASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 AL358472.4-201ENST00000633140 710 ntBASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CTPS2Q9NRF8 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms