Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.99■□□□□ 0.47
HPS4Q9NQG7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.99■□□□□ 0.47
HPS4Q9NQG7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AC211486.1-202ENST00000416371 468 ntBASIC17.98■□□□□ 0.47
HPS4Q9NQG7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 ALG1L5P-201ENST00000482043 771 ntBASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AC211476.1-201ENST00000503899 468 ntBASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AC002310.6-201ENST00000624451 1377 ntBASIC17.98■□□□□ 0.47
HPS4Q9NQG7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 BICD1-207ENST00000551848 1962 ntBASIC17.98■□□□□ 0.47
HPS4Q9NQG7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HPS4Q9NQG7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 PRSS29P-201ENST00000440800 595 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AP006288.1-201ENST00000446065 395 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AL513190.1-201ENST00000621254 727 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AL805961.1-202ENST00000641562 540 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 AL354751.1-201ENST00000412768 1863 ntBASIC17.97■□□□□ 0.47
HPS4Q9NQG7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.97■□□□□ 0.47
HPS4Q9NQG7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 IGLL3P-201ENST00000412472 434 ntBASIC17.96■□□□□ 0.47
HPS4Q9NQG7 YBX1P5-201ENST00000509441 847 ntBASIC17.96■□□□□ 0.47
HPS4Q9NQG7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.96■□□□□ 0.47
HPS4Q9NQG7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms