Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NEUROD4Q9HD90 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 CLEC4GP1-201ENST00000596555 870 ntBASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 AL049757.1-201ENST00000616842 1596 ntBASIC16.43■□□□□ 0.22
NEUROD4Q9HD90 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 AC116407.4-201ENST00000623319 1061 ntBASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NEUROD4Q9HD90 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.41■□□□□ 0.22
NEUROD4Q9HD90 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms