Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 AC008687.5-201ENST00000593746 558 ntBASIC18.32■□□□□ 0.52
CD248Q9HCU0 AL591684.3-201ENST00000605187 298 ntBASIC18.32■□□□□ 0.52
CD248Q9HCU0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CD248Q9HCU0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.32■□□□□ 0.52
CD248Q9HCU0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 RCN1P2-201ENST00000398357 915 ntBASIC18.31■□□□□ 0.52
CD248Q9HCU0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC096582.2-201ENST00000510860 516 ntBASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC079776.4-201ENST00000511039 504 ntBASIC18.31■□□□□ 0.52
CD248Q9HCU0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 AC112777.1-201ENST00000540175 1423 ntBASIC18.31■□□□□ 0.52
CD248Q9HCU0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.31■□□□□ 0.52
CD248Q9HCU0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD248Q9HCU0 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 AL499627.1-201ENST00000569373 2188 ntBASIC18.3■□□□□ 0.52
CD248Q9HCU0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 AC148477.8-201ENST00000624298 468 ntBASIC18.3■□□□□ 0.52
CD248Q9HCU0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 AC092850.2-201ENST00000623821 2697 ntBASIC18.3■□□□□ 0.52
CD248Q9HCU0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CD248Q9HCU0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD248Q9HCU0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms