Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.14■□□□□ 0.81
VAT1LQ9HCJ6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 NCF1C-201ENST00000438382 1427 ntBASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 LINC00982-205ENST00000420957 435 ntBASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 AC004706.3-202ENST00000621574 984 ntBASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VAT1LQ9HCJ6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 AC073621.1-201ENST00000392730 636 ntBASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 RNA5SP415-201ENST00000517246 115 ntBASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 IGHV3-22-201ENST00000520721 359 ntBASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 AC006557.2-201ENST00000592985 1240 ntBASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 AL356488.2-201ENST00000602755 427 ntBASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VAT1LQ9HCJ6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.11■□□□□ 0.81
VAT1LQ9HCJ6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms