Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBQLN3Q9H347 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 AC106795.1-205ENST00000512851 1056 ntBASIC16.13■□□□□ 0.17
UBQLN3Q9H347 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 AL160237.2-201ENST00000556165 472 ntBASIC16.13■□□□□ 0.17
UBQLN3Q9H347 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 REXO1L11P-201ENST00000620964 1927 ntBASIC16.13■□□□□ 0.17
UBQLN3Q9H347 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBQLN3Q9H347 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 LINC01451-201ENST00000623792 534 ntBASIC16.12■□□□□ 0.17
UBQLN3Q9H347 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
UBQLN3Q9H347 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.11■□□□□ 0.17
UBQLN3Q9H347 RBM17P3-201ENST00000417687 1192 ntBASIC16.11■□□□□ 0.17
UBQLN3Q9H347 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms