Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
LITAFQ99732 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.58□□□□□ -0.56
LITAFQ99732 AC006538.1-201ENST00000567905 1585 ntBASIC11.58□□□□□ -0.56
LITAFQ99732 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.58□□□□□ -0.56
LITAFQ99732 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LITAFQ99732 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.57□□□□□ -0.56
LITAFQ99732 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 MESTP1-201ENST00000404287 994 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 TSPY6P-201ENST00000448518 926 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.57□□□□□ -0.56
LITAFQ99732 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 WWOX-216ENST00000569818 525 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC11.57□□□□□ -0.56
LITAFQ99732 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC11.57□□□□□ -0.56
LITAFQ99732 AC010240.3-201ENST00000607688 395 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 CR392000.1-201ENST00000624770 1228 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 AC112497.1-201ENST00000624824 639 ntBASIC11.57□□□□□ -0.56
LITAFQ99732 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
LITAFQ99732 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
LITAFQ99732 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 STX3-203ENST00000529177 1571 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
LITAFQ99732 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
LITAFQ99732 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LITAFQ99732 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LITAFQ99732 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.57□□□□□ -0.56
LITAFQ99732 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC11.56□□□□□ -0.56
LITAFQ99732 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 KRT18P29-201ENST00000397031 1267 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms