Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA3Q99618 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CDCA3Q99618 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.93■□□□□ 0.46
CDCA3Q99618 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA3Q99618 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.93■□□□□ 0.46
CDCA3Q99618 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.93■□□□□ 0.46
CDCA3Q99618 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.93■□□□□ 0.46
CDCA3Q99618 AC120498.9-201ENST00000339021 3867 ntBASIC17.93■□□□□ 0.46
CDCA3Q99618 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDCA3Q99618 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.93■□□□□ 0.46
CDCA3Q99618 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CDCA3Q99618 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDCA3Q99618 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 WASH6P-202ENST00000359512 1437 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 AC097493.3-201ENST00000509725 367 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 CR383656.12-201ENST00000549567 513 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 MIR6080-201ENST00000617359 66 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 AC008267.7-201ENST00000624570 1194 ntBASIC17.92■□□□□ 0.46
CDCA3Q99618 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.92■□□□□ 0.46
CDCA3Q99618 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.92■□□□□ 0.46
CDCA3Q99618 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDCA3Q99618 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
CDCA3Q99618 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDCA3Q99618 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CDCA3Q99618 HCG4-201ENST00000418983 998 ntBASIC17.91■□□□□ 0.46
CDCA3Q99618 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.91■□□□□ 0.46
CDCA3Q99618 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.91■□□□□ 0.46
CDCA3Q99618 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CDCA3Q99618 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.91■□□□□ 0.46
CDCA3Q99618 WIZP1-201ENST00000531444 2299 ntBASIC17.91■□□□□ 0.46
CDCA3Q99618 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDCA3Q99618 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDCA3Q99618 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 REXO1L11P-201ENST00000620964 1927 ntBASIC17.9■□□□□ 0.46
CDCA3Q99618 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDCA3Q99618 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 AL353732.1-201ENST00000569618 1459 ntBASIC17.9■□□□□ 0.46
CDCA3Q99618 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.9■□□□□ 0.46
CDCA3Q99618 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDCA3Q99618 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms