Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCL13Q99616 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.58□□□□□ -0.08
CCL13Q99616 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.58□□□□□ -0.08
CCL13Q99616 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 AC004817.3-201ENST00000602957 2129 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 AL356309.3-201ENST00000624132 1934 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 AC079776.2-201ENST00000641154 1609 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.57□□□□□ -0.08
CCL13Q99616 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 SPDYE21P-201ENST00000413323 827 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 FGFR3P6-201ENST00000457012 610 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.57□□□□□ -0.08
CCL13Q99616 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 NKAPP1-205ENST00000585790 367 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.57□□□□□ -0.08
CCL13Q99616 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.57□□□□□ -0.08
CCL13Q99616 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.57□□□□□ -0.08
CCL13Q99616 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.57□□□□□ -0.08
CCL13Q99616 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CCL13Q99616 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CCL13Q99616 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 CROCCP1-201ENST00000426910 5675 ntBASIC14.56□□□□□ -0.08
CCL13Q99616 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 AC148477.5-201ENST00000625164 1645 ntBASIC14.56□□□□□ -0.08
CCL13Q99616 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 PP12613-201ENST00000424958 2230 ntBASIC14.56□□□□□ -0.08
CCL13Q99616 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.56□□□□□ -0.08
CCL13Q99616 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 SIGLEC30P-201ENST00000455569 941 ntBASIC14.56□□□□□ -0.08
CCL13Q99616 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.56□□□□□ -0.08
CCL13Q99616 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.56□□□□□ -0.08
CCL13Q99616 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CCL13Q99616 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CCL13Q99616 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms