Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 AC021087.4-201ENST00000563761 564 ntBASIC17.98■□□□□ 0.47
HAPLN3Q96S86 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 MTDHP4-201ENST00000600287 670 ntBASIC17.98■□□□□ 0.47
HAPLN3Q96S86 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.98■□□□□ 0.47
HAPLN3Q96S86 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 ACTG1P4-201ENST00000425123 1122 ntBASIC17.97■□□□□ 0.47
HAPLN3Q96S86 FAM197Y8-203ENST00000450145 560 ntBASIC17.97■□□□□ 0.47
HAPLN3Q96S86 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 AL160237.2-201ENST00000556165 472 ntBASIC17.97■□□□□ 0.47
HAPLN3Q96S86 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 TP73-AS1-207ENST00000624167 988 ntBASIC17.97■□□□□ 0.47
HAPLN3Q96S86 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
HAPLN3Q96S86 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 PP12613-201ENST00000424958 2230 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 CROCCP2-202ENST00000412962 2773 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 RNPS1P1-201ENST00000507437 918 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AC073648.2-201ENST00000510116 352 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AC025062.2-201ENST00000605477 670 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AL589182.2-201ENST00000619332 1049 ntBASIC17.96■□□□□ 0.47
HAPLN3Q96S86 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HAPLN3Q96S86 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms