Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 SLC25A1P3-201ENST00000395415 828 ntBASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
MS4A4EQ96PG1 AC080080.1-201ENST00000625121 2420 ntBASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PMPCAP1-201ENST00000508114 1576 ntBASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 AL121761.2-201ENST00000598007 1648 ntBASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 AC138894.3-201ENST00000603787 634 ntBASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
MS4A4EQ96PG1 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 AL135999.2-201ENST00000622438 1686 ntBASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
MS4A4EQ96PG1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
MS4A4EQ96PG1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms