Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 AL627223.1-201ENST00000416693 442 ntBASIC18.4■□□□□ 0.54
CASD1Q96PB1 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 AC025678.2-201ENST00000562061 970 ntBASIC18.4■□□□□ 0.54
CASD1Q96PB1 MIR4515-201ENST00000584082 81 ntBASIC18.4■□□□□ 0.54
CASD1Q96PB1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 AC092364.2-202ENST00000597012 1073 ntBASIC18.4■□□□□ 0.54
CASD1Q96PB1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 AC012317.2-201ENST00000623305 2251 ntBASIC18.4■□□□□ 0.54
CASD1Q96PB1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CASD1Q96PB1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASD1Q96PB1 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CASD1Q96PB1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CASD1Q96PB1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CASD1Q96PB1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.39■□□□□ 0.54
CASD1Q96PB1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 FAM86C2P-203ENST00000528684 1004 ntBASIC18.39■□□□□ 0.53
CASD1Q96PB1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SPCS2P1-201ENST00000561636 679 ntBASIC18.39■□□□□ 0.53
CASD1Q96PB1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CASD1Q96PB1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CASD1Q96PB1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 AC011467.4-201ENST00000594891 528 ntBASIC18.38■□□□□ 0.53
CASD1Q96PB1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 AC009093.7-201ENST00000623853 1223 ntBASIC18.38■□□□□ 0.53
CASD1Q96PB1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.38■□□□□ 0.53
CASD1Q96PB1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CASD1Q96PB1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CASD1Q96PB1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SPDYE11-202ENST00000450699 704 ntBASIC18.37■□□□□ 0.53
CASD1Q96PB1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.37■□□□□ 0.53
CASD1Q96PB1 SPDYE9P-201ENST00000570642 692 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms