Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP54Q96N23 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP54Q96N23 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP54Q96N23 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.87■□□□□ 0.29
CFAP54Q96N23 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CFAP54Q96N23 PI4KAP1-204ENST00000612579 1703 ntBASIC16.87■□□□□ 0.29
CFAP54Q96N23 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 AP006294.1-201ENST00000415407 339 ntBASIC16.86■□□□□ 0.29
CFAP54Q96N23 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 SPCS2P4-201ENST00000436160 681 ntBASIC16.86■□□□□ 0.29
CFAP54Q96N23 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 AC027369.6-201ENST00000525520 931 ntBASIC16.86■□□□□ 0.29
CFAP54Q96N23 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CFAP54Q96N23 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CFAP54Q96N23 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 RN7SL837P-201ENST00000463010 287 ntBASIC16.85■□□□□ 0.29
CFAP54Q96N23 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 UXT-AS1-201ENST00000590504 1525 ntBASIC16.85■□□□□ 0.29
CFAP54Q96N23 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 FXNP2-201ENST00000411625 547 ntBASIC16.85■□□□□ 0.29
CFAP54Q96N23 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 AL391825.1-201ENST00000457671 1364 ntBASIC16.85■□□□□ 0.29
CFAP54Q96N23 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CFAP54Q96N23 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CFAP54Q96N23 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 AL512343.1-201ENST00000605837 169 ntBASIC16.84■□□□□ 0.29
CFAP54Q96N23 MIR6080-201ENST00000617359 66 ntBASIC16.84■□□□□ 0.29
CFAP54Q96N23 AL590560.3-201ENST00000623350 461 ntBASIC16.84■□□□□ 0.29
CFAP54Q96N23 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 AKAP8P1-201ENST00000434743 1349 ntBASIC16.84■□□□□ 0.29
CFAP54Q96N23 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CFAP54Q96N23 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.84■□□□□ 0.29
CFAP54Q96N23 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.83■□□□□ 0.29
CFAP54Q96N23 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CFAP54Q96N23 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.29
CFAP54Q96N23 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.83■□□□□ 0.28
CFAP54Q96N23 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms