Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX27Q96L92 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX27Q96L92 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SNX27Q96L92 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SNX27Q96L92 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
SNX27Q96L92 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.7■□□□□ 0.58
SNX27Q96L92 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.7■□□□□ 0.58
SNX27Q96L92 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
SNX27Q96L92 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SNX27Q96L92 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
SNX27Q96L92 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.7■□□□□ 0.58
SNX27Q96L92 AC134684.3-201ENST00000641758 218 ntBASIC18.7■□□□□ 0.58
SNX27Q96L92 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX27Q96L92 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SNX27Q96L92 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.7■□□□□ 0.58
SNX27Q96L92 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX27Q96L92 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SNX27Q96L92 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.69■□□□□ 0.58
SNX27Q96L92 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.69■□□□□ 0.58
SNX27Q96L92 AC007967.2-201ENST00000432613 625 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 METTL21AP1-201ENST00000438852 635 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.69■□□□□ 0.58
SNX27Q96L92 MIR3687-2-201ENST00000577708 61 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 MIR3687-1-201ENST00000614492 61 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 AL035252.4-201ENST00000624174 288 ntBASIC18.69■□□□□ 0.58
SNX27Q96L92 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SNX27Q96L92 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SNX27Q96L92 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX27Q96L92 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX27Q96L92 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 AC005034.1-201ENST00000426657 489 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.68■□□□□ 0.58
SNX27Q96L92 KRT18P3-201ENST00000451602 1288 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.68■□□□□ 0.58
SNX27Q96L92 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 MIR4751-201ENST00000578027 74 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 AL606495.2-201ENST00000605867 535 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 AC084346.2-201ENST00000607097 949 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 AC004790.2-201ENST00000623588 572 ntBASIC18.68■□□□□ 0.58
SNX27Q96L92 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SNX27Q96L92 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
SNX27Q96L92 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SNX27Q96L92 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SNX27Q96L92 AC018470.1-201ENST00000624790 3129 ntBASIC18.67■□□□□ 0.58
SNX27Q96L92 AC068880.1-201ENST00000507289 2297 ntBASIC18.67■□□□□ 0.58
SNX27Q96L92 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
SNX27Q96L92 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX27Q96L92 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.67■□□□□ 0.58
SNX27Q96L92 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNX27Q96L92 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SNX27Q96L92 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.67■□□□□ 0.58
SNX27Q96L92 DUX4L17-201ENST00000557360 1267 ntBASIC18.67■□□□□ 0.58
SNX27Q96L92 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.67■□□□□ 0.58
SNX27Q96L92 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms