Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC016396.2-201ENST00000562575 1417 ntBASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC104109.2-201ENST00000602919 1418 ntBASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 UNC93B6-202ENST00000528242 690 ntBASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC106730.1-201ENST00000566722 1090 ntBASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 ZNF259P1-201ENST00000407656 1365 ntBASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.25■□□□□ 0.51
SMARCD1Q96GM5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 AL590787.1-201ENST00000568856 1315 ntBASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 AP002414.1-201ENST00000391405 1147 ntBASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 AC008667.4-201ENST00000607370 168 ntBASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SMARCD1Q96GM5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 PTCHD3P3-201ENST00000403073 906 ntBASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 LINC00896-202ENST00000609602 2128 ntBASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SMARCD1Q96GM5 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMARCD1Q96GM5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms