Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SIPA1Q96FS4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SIPA1Q96FS4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 AC254562.1-201ENST00000417586 456 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 RHOQP3-201ENST00000437982 621 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 CEND1P1-201ENST00000451006 455 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 KRT19P2-202ENST00000557173 1012 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 AC027796.2-201ENST00000575326 344 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 AC007064.4-201ENST00000637740 555 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 ELL2P1-201ENST00000413990 1906 ntBASIC17.39■□□□□ 0.37
SIPA1Q96FS4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIPA1Q96FS4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC023141.13-201ENST00000604991 943 ntBASIC17.38■□□□□ 0.37
SIPA1Q96FS4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 KRT18P28-201ENST00000453838 1332 ntBASIC17.38■□□□□ 0.37
SIPA1Q96FS4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC009113.1-201ENST00000570267 2443 ntBASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC025580.3-201ENST00000617932 1424 ntBASIC17.38■□□□□ 0.37
SIPA1Q96FS4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SIPA1Q96FS4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.37■□□□□ 0.37
SIPA1Q96FS4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 AL135999.2-201ENST00000622438 1686 ntBASIC17.37■□□□□ 0.37
SIPA1Q96FS4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 AL355385.1-201ENST00000606123 409 ntBASIC17.37■□□□□ 0.37
SIPA1Q96FS4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SIPA1Q96FS4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms