Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 RN7SL606P-201ENST00000472779 293 ntBASIC17.79■□□□□ 0.44
CCDC97Q96F63 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 DUTP2-201ENST00000519164 463 ntBASIC17.79■□□□□ 0.44
CCDC97Q96F63 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC97Q96F63 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
CCDC97Q96F63 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 MIR600HG-201ENST00000449175 5984 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AL022342.1-201ENST00000400363 863 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 DRAXINP1-201ENST00000437611 948 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 KRT18P65-201ENST00000439811 1286 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC068472.1-201ENST00000474589 881 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AL662844.1-201ENST00000546340 181 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC012615.1-201ENST00000565797 1299 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC008687.5-201ENST00000593746 558 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AL592071.1-201ENST00000611956 408 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC006538.3-201ENST00000612495 578 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC023511.2-201ENST00000618803 211 ntBASIC17.78■□□□□ 0.44
CCDC97Q96F63 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC97Q96F63 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC97Q96F63 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 AP000347.1-202ENST00000435868 847 ntBASIC17.77■□□□□ 0.44
CCDC97Q96F63 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC97Q96F63 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CCDC97Q96F63 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms