Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SNRNP40Q96DI7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 AC135776.1-201ENST00000319817 2481 ntBASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 AL355306.1-201ENST00000415580 579 ntBASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 AC093214.1-201ENST00000511688 1107 ntBASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 FAM86C2P-203ENST00000528684 1004 ntBASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 AC190387.1-201ENST00000551683 408 ntBASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.55■□□□□ 0.08
SNRNP40Q96DI7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 PMS2P4-201ENST00000412466 1052 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SPDYE11-202ENST00000450699 704 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 KRT8P48-201ENST00000515599 1220 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SPDYE9P-201ENST00000570642 692 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SPDYE10P-202ENST00000612005 668 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SPDYE8P-202ENST00000612377 668 ntBASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SNRNP40Q96DI7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms