Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ATL1Q8WXF7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17■□□□□ 0.31
ATL1Q8WXF7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17■□□□□ 0.31
ATL1Q8WXF7 AC099336.1-202ENST00000602961 463 ntBASIC17■□□□□ 0.31
ATL1Q8WXF7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17■□□□□ 0.31
ATL1Q8WXF7 AD001527.2-201ENST00000622994 785 ntBASIC17■□□□□ 0.31
ATL1Q8WXF7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17■□□□□ 0.31
ATL1Q8WXF7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 PCDHA12-202ENST00000613593 2588 ntBASIC17■□□□□ 0.31
ATL1Q8WXF7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17■□□□□ 0.31
ATL1Q8WXF7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 AC046185.3-201ENST00000623228 1824 ntBASIC17■□□□□ 0.31
ATL1Q8WXF7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17■□□□□ 0.31
ATL1Q8WXF7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ATL1Q8WXF7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATL1Q8WXF7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATL1Q8WXF7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 STK19B-204ENST00000512515 211 ntBASIC16.99■□□□□ 0.31
ATL1Q8WXF7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.99■□□□□ 0.31
ATL1Q8WXF7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 KRT16P4-201ENST00000453883 522 ntBASIC16.98■□□□□ 0.31
ATL1Q8WXF7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATL1Q8WXF7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ATL1Q8WXF7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms