Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 AC092053.1-201ENST00000605787 1936 ntBASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM11BQ8TCY0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MIR663A-201ENST00000385250 93 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC008040.2-201ENST00000461049 708 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MIR6821-201ENST00000617625 74 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AL365209.1-201ENST00000624418 6473 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 KRT8P7-201ENST00000533003 1432 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 DBET-201ENST00000630918 3363 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AL136379.1-201ENST00000623471 2642 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC092364.2-201ENST00000596710 2692 ntBASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM11BQ8TCY0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 AC067930.6-201ENST00000623257 4947 ntBASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM11BQ8TCY0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms