Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RDH11Q8TC12 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RDH11Q8TC12 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 EGFEM1P-202ENST00000431685 1563 ntBASIC17.11■□□□□ 0.33
RDH11Q8TC12 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 AC139887.4-201ENST00000607877 719 ntBASIC17.11■□□□□ 0.33
RDH11Q8TC12 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RDH11Q8TC12 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.11■□□□□ 0.33
RDH11Q8TC12 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC103564.2-201ENST00000432853 1299 ntBASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC111152.3-201ENST00000569699 673 ntBASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.1■□□□□ 0.33
RDH11Q8TC12 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RDH11Q8TC12 AC078925.2-201ENST00000624013 1973 ntBASIC17.09■□□□□ 0.33
RDH11Q8TC12 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RDH11Q8TC12 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.09■□□□□ 0.33
RDH11Q8TC12 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms