Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 AC138894.3-201ENST00000603787 634 ntBASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCDH19Q8TAB3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 UNC93B7-201ENST00000509439 705 ntBASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 AC148477.5-201ENST00000625164 1645 ntBASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 AC092053.1-201ENST00000605787 1936 ntBASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDH19Q8TAB3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 ABCD1P5-201ENST00000445663 754 ntBASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 IFNL4P1-201ENST00000607083 540 ntBASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 AL732292.2-201ENST00000609649 430 ntBASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDH19Q8TAB3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDH19Q8TAB3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms