Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CFAP61Q8NHU2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 LINC00167-201ENST00000530583 1419 ntBASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 TSPY12P-201ENST00000421279 868 ntBASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AC011498.5-201ENST00000592027 486 ntBASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 AL358472.4-201ENST00000633140 710 ntBASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.66■□□□□ 0.42
CFAP61Q8NHU2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 TSPY22P-201ENST00000427496 604 ntBASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 IER3-202ENST00000376377 1350 ntBASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 UBALD1-205ENST00000590891 2641 ntBASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CFAP61Q8NHU2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
CFAP61Q8NHU2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms