Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 HLA-DQB2-231ENST00000435145 2026 ntBASIC10.77□□□□□ -0.69
SVIPQ8NHG7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.77□□□□□ -0.69
SVIPQ8NHG7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 CD22-203ENST00000419549 2642 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 PYHIN1-201ENST00000368135 1662 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 DNAJA4-201ENST00000343789 2961 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AC010867.1-201ENST00000558038 2289 ntBASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AC084262.1-201ENST00000567818 751 ntBASIC10.76□□□□□ -0.69
SVIPQ8NHG7 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AGGF1P2-201ENST00000426656 2106 ntBASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AC061975.1-201ENST00000564762 2736 ntBASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AC067930.6-201ENST00000623257 4947 ntBASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SVIPQ8NHG7 DPP3-205ENST00000530165 2251 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 AC126564.1-201ENST00000623628 2013 ntBASIC10.75□□□□□ -0.69
SVIPQ8NHG7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC10.75□□□□□ -0.69
SVIPQ8NHG7 EIF1B-AS1-205ENST00000629723 2399 ntTSL 3 BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms