Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.68■□□□□ 0.58
BEST2Q8NFU1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 GPR89P-201ENST00000407924 1495 ntBASIC18.67■□□□□ 0.58
BEST2Q8NFU1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 UNC93B6-202ENST00000528242 690 ntBASIC18.67■□□□□ 0.58
BEST2Q8NFU1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.67■□□□□ 0.58
BEST2Q8NFU1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 AC104109.2-201ENST00000602919 1418 ntBASIC18.66■□□□□ 0.58
BEST2Q8NFU1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 Z83851.2-201ENST00000609564 659 ntBASIC18.66■□□□□ 0.58
BEST2Q8NFU1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 AC068880.1-201ENST00000507289 2297 ntBASIC18.66■□□□□ 0.58
BEST2Q8NFU1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.66■□□□□ 0.58
BEST2Q8NFU1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.65■□□□□ 0.58
BEST2Q8NFU1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 RPS15P9-201ENST00000494093 319 ntBASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 AC006538.3-201ENST00000612495 578 ntBASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.65■□□□□ 0.58
BEST2Q8NFU1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BEST2Q8NFU1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
BEST2Q8NFU1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BEST2Q8NFU1 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms