Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 SLC25A1P3-201ENST00000395415 828 ntBASIC23.8■■□□□ 1.4
XRN1Q8IZH2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 MIR4453-201ENST00000584019 89 ntBASIC23.8■■□□□ 1.4
XRN1Q8IZH2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 AC007967.4-201ENST00000614700 386 ntBASIC23.8■■□□□ 1.4
XRN1Q8IZH2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRN1Q8IZH2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 PIN1P1-201ENST00000412108 996 ntBASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AL138828.2-201ENST00000615812 383 ntBASIC23.79■■□□□ 1.4
XRN1Q8IZH2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC23.79■■□□□ 1.4
XRN1Q8IZH2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
XRN1Q8IZH2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 AC091167.2-201ENST00000579581 588 ntBASIC23.77■■□□□ 1.4
XRN1Q8IZH2 MIR6752-201ENST00000618442 71 ntBASIC23.77■■□□□ 1.4
XRN1Q8IZH2 LINC01451-201ENST00000623792 534 ntBASIC23.77■■□□□ 1.4
XRN1Q8IZH2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.77■■□□□ 1.4
XRN1Q8IZH2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 NME2P1-201ENST00000426182 414 ntBASIC23.76■■□□□ 1.39
XRN1Q8IZH2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 AC004790.1-201ENST00000612686 536 ntBASIC23.76■■□□□ 1.39
XRN1Q8IZH2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 LYSMD4-203ENST00000378904 2122 ntBASIC23.76■■□□□ 1.39
XRN1Q8IZH2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC23.76■■□□□ 1.39
XRN1Q8IZH2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
XRN1Q8IZH2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms