Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC116Q8IYX3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 NUS1P2-201ENST00000417358 873 ntBASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 HCG4P8-203ENST00000443049 980 ntBASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 STK19B-204ENST00000512515 211 ntBASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AC138894.3-201ENST00000603787 634 ntBASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 AC132938.5-201ENST00000624980 1813 ntBASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC116Q8IYX3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC116Q8IYX3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CCDC116Q8IYX3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CCDC116Q8IYX3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 AC073592.5-201ENST00000624854 528 ntBASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC116Q8IYX3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC116Q8IYX3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms