Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CUL9Q8IWT3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CUL9Q8IWT3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AP003419.4-201ENST00000616071 517 ntBASIC17.31■□□□□ 0.36
CUL9Q8IWT3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.31■□□□□ 0.36
CUL9Q8IWT3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 MEP1AP4-201ENST00000423244 1087 ntBASIC17.31■□□□□ 0.36
CUL9Q8IWT3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AC005077.2-201ENST00000449786 690 ntBASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CUL9Q8IWT3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 RPL37AP1-201ENST00000412502 279 ntBASIC17.3■□□□□ 0.36
CUL9Q8IWT3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.3■□□□□ 0.36
CUL9Q8IWT3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 AC107918.2-201ENST00000530817 355 ntBASIC17.3■□□□□ 0.36
CUL9Q8IWT3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CUL9Q8IWT3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AC004898.1-201ENST00000451057 766 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AC018635.2-201ENST00000608625 364 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 HMGA1P7-201ENST00000406908 502 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 RN7SL818P-201ENST00000485099 259 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 RN7SL720P-201ENST00000488178 304 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 RN7SL725P-201ENST00000606439 259 ntBASIC17.29■□□□□ 0.36
CUL9Q8IWT3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CUL9Q8IWT3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms