Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
APLFQ8IW19 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
APLFQ8IW19 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.3■□□□□ 0.36
APLFQ8IW19 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
APLFQ8IW19 AC022188.1-201ENST00000620960 1664 ntBASIC17.3■□□□□ 0.36
APLFQ8IW19 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
APLFQ8IW19 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 AC099063.4-201ENST00000641099 1602 ntBASIC17.3■□□□□ 0.36
APLFQ8IW19 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
APLFQ8IW19 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.3■□□□□ 0.36
APLFQ8IW19 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.3■□□□□ 0.36
APLFQ8IW19 IFNL4P1-201ENST00000607083 540 ntBASIC17.3■□□□□ 0.36
APLFQ8IW19 AL121772.3-201ENST00000610840 674 ntBASIC17.3■□□□□ 0.36
APLFQ8IW19 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.3■□□□□ 0.36
APLFQ8IW19 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
APLFQ8IW19 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.3■□□□□ 0.36
APLFQ8IW19 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APLFQ8IW19 HOXB1-202ENST00000577092 1414 ntBASIC17.3■□□□□ 0.36
APLFQ8IW19 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.29■□□□□ 0.36
APLFQ8IW19 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.29■□□□□ 0.36
APLFQ8IW19 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.29■□□□□ 0.36
APLFQ8IW19 AC012615.1-201ENST00000565797 1299 ntBASIC17.29■□□□□ 0.36
APLFQ8IW19 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.29■□□□□ 0.36
APLFQ8IW19 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.29■□□□□ 0.36
APLFQ8IW19 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
APLFQ8IW19 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APLFQ8IW19 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.29■□□□□ 0.36
APLFQ8IW19 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
APLFQ8IW19 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
APLFQ8IW19 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
APLFQ8IW19 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 AC026691.1-201ENST00000602502 2017 ntBASIC17.28■□□□□ 0.36
APLFQ8IW19 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APLFQ8IW19 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.28■□□□□ 0.36
APLFQ8IW19 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.28■□□□□ 0.36
APLFQ8IW19 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.28■□□□□ 0.36
APLFQ8IW19 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.28■□□□□ 0.36
APLFQ8IW19 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 AC104390.1-201ENST00000555663 520 ntBASIC17.28■□□□□ 0.36
APLFQ8IW19 RNF126P1-202ENST00000569893 925 ntBASIC17.28■□□□□ 0.36
APLFQ8IW19 LINC01711-201ENST00000598340 967 ntBASIC17.28■□□□□ 0.36
APLFQ8IW19 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.28■□□□□ 0.36
APLFQ8IW19 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
APLFQ8IW19 PCDHA14-201ENST00000506751 2298 ntBASIC17.28■□□□□ 0.36
APLFQ8IW19 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APLFQ8IW19 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms