Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AC005034.1-201ENST00000426657 489 ntBASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AP000344.2-201ENST00000512987 629 ntBASIC18.43■□□□□ 0.54
RNF135Q8IUD6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AC073592.4-201ENST00000623827 446 ntBASIC18.43■□□□□ 0.54
RNF135Q8IUD6 AL035252.4-201ENST00000624174 288 ntBASIC18.43■□□□□ 0.54
RNF135Q8IUD6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 ABALON-201ENST00000629058 1903 ntBASIC18.43■□□□□ 0.54
RNF135Q8IUD6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF135Q8IUD6 PMPCAP1-201ENST00000508114 1576 ntBASIC18.42■□□□□ 0.54
RNF135Q8IUD6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 KRT18P65-201ENST00000439811 1286 ntBASIC18.42■□□□□ 0.54
RNF135Q8IUD6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 FZD10-202ENST00000539839 3282 ntBASIC18.42■□□□□ 0.54
RNF135Q8IUD6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF135Q8IUD6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC093677.2-201ENST00000600169 1863 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC108073.2-201ENST00000464002 357 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC112698.1-201ENST00000510299 916 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AF228730.6-201ENST00000641497 218 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC084121.3-201ENST00000641716 218 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC105233.6-201ENST00000642093 218 ntBASIC18.41■□□□□ 0.54
RNF135Q8IUD6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF135Q8IUD6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 REXO1L9P-201ENST00000604264 2108 ntBASIC18.4■□□□□ 0.54
RNF135Q8IUD6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 NOC2LP1-202ENST00000452600 2235 ntBASIC18.4■□□□□ 0.54
RNF135Q8IUD6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms