Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AC211429.1-201ENST00000415277 523 ntBASIC17.54■□□□□ 0.4
PACS2Q86VP3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AP005242.2-201ENST00000580065 1175 ntBASIC17.54■□□□□ 0.4
PACS2Q86VP3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 LINC01023-201ENST00000606054 436 ntBASIC17.54■□□□□ 0.4
PACS2Q86VP3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.54■□□□□ 0.4
PACS2Q86VP3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PACS2Q86VP3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 KRT8P41-201ENST00000533985 1514 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 AL390955.1-201ENST00000428694 934 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 AC008040.2-201ENST00000461049 708 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 NAPSB-206ENST00000562112 1266 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 C2orf69P3-201ENST00000565542 1120 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 AC133561.5-201ENST00000635547 218 ntBASIC17.53■□□□□ 0.4
PACS2Q86VP3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.53■□□□□ 0.4
PACS2Q86VP3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PACS2Q86VP3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 AC093010.1-201ENST00000473625 1624 ntBASIC17.52■□□□□ 0.4
PACS2Q86VP3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.52■□□□□ 0.4
PACS2Q86VP3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PACS2Q86VP3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.52■□□□□ 0.4
PACS2Q86VP3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
PACS2Q86VP3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PACS2Q86VP3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
PACS2Q86VP3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PACS2Q86VP3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PACS2Q86VP3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PACS2Q86VP3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.52■□□□□ 0.39
PACS2Q86VP3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.52■□□□□ 0.39
PACS2Q86VP3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.52■□□□□ 0.39
PACS2Q86VP3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms